Biology and Genetics Links

Entrez

ExPasy & SwissProt

N.C.B.I.

PubMed

Material Safety Data Sheets

Brutlag (Bioinformatics)

Dana-Farber Cancer Institute Molecular Biology Core Facility

EMBL-Heidelberg

GCG manual

Signal Transduction Knowledge Environment (part of Science online)

Visual embryos
 
 
Bacteria
A Bacterial Primer

American Type Culture Collection

E. coli Genetic Stock Center

E. coli Genome Center

Salmonella Genetic Stock Center
 
 
Who’s who amongst bacteria: (up-to-date)

  • Bacterial species nomenclature
  • List of bacterial names with standing in nomenclature

    •  
    Biochemistry
    E. coli metabolism

    Enzyme Datasheets: Wortington Catalog’sSWISS-PORT search
     
     
    Genomics
    Camilla Kao web page with genomics links

    Comparative genomics:

  • Campylobacter jejuni
  • Corynebacterium diphtheriae NCTC 13129
  • Mycobacterium tuberculosis H37Rv
  • Pseudomonas Genome Project

    •  
    DNA microarray & Data analysis:

  • ArrayExpress Database
  • ATGC Consortium
  • ExpressDB Information Page (John Aach and Wayne Rindone, Harvard Univ.)
  • George Church lab (Harvard Med. School)
  • M-Guide: Pat Brown’s manual to build and use a microarrayer
  • Microarray & Data Analysis (Wentian Li, Rockefeller Univ.)
  • microarray.org
  • National Cancer Institute
  • Owen, Art (Reports, course descriptions etc)
  • Pat Brown’s lab (which includes the microarrayer)
  • Puces-ADN (Server at the CNRS, France)
  • Research Genetics
  • Seigel-C Protocols
  • GeneCensus Genome Comparison
  • Gene-Chips.com (DNA Microarrays)
  • Sanger Sequencing Center

    •  
    Molecular Biology
    Codon usage of about 5000 organisms

    Dana-Farber Cancer Institute Molecular Biology Core Facility

    GCG manual

    Restriction Enzyme Database REBASE (New England Biolab): Comprehensive Enzyme list
     
     
    Sequence Analysis and Presentation
    BOXSHADE (Presentation of sequence alignment)

    ExPasy and SwissProt

    Multiple Sequence Alignment

    National Center for Biotechnology Information (NCBI)

    ORF’s Finder at NCBI

    pI and M.W. (calculated)

    ProSAL (Protein Sequence Analysis Launcher)

    SeqAnalRef

    Deletion Project
     
     
    Yeast
    Gene-Chips.com

    MicroArrayer at Pat Brown’s lab

    Saccharomyces Genome Database

    Yeast gene duplications
     
     
    Database Searches
    ExPASy and SwissProt

    Literature:

  • Entrez
  • Institute for Scientific Information (ISI) (Also look at Web of science (part of Science Citation Index))
  • PubMed

    • Material Safety Data Sheets (searchable)

    National Center for Biotechnology Information (N.C.B.I.)

    Restriction Enzyme Database: Comprehensive Enzyme list within REBASE

    Web of science (part of Science Citation Index)
     
     
    Scientific Societies
    American Association for the Advancement of Science

    American Cancer Society

    American Chemical Society

    American Society for Microbiology

    British Society for Antimicrobial Chemotherapy

    Canadian Federation of Biological Societies

    Federation of American Societies for Experimental Biology

    National Academy of Sciences

    Pittsburgh Diffraction Society